A deeper understanding of the interactions between soils and plants, especially at the root zone, where they take up water and nutrients may support sustainable intensification of agricultural production. Research is indicating that a greater understanding of roots and soil functions may lead to increases in crop yields, reductions in greenhouse gas emissions from soils, enhanced productivity in grasslands and reductions in fertilizer requirements to land. However, data gaps remain in our understanding of how plant roots interact with their environment from a physiological and phenotypic perspective. Plant Phenotyping has been described as the bottleneck to food security, yet the real bottleneck to plant phenotyping is thought to be image analysis and processing. The challenge of ensuring food security provides the impetus for ROOTED (Root Phenotyping Integrated Educational Doctoral Network). ROOTED will apply deep learning and artificial intelligence to speed up data generation in root phenotyping.
Agriculture is increasingly using digital technologies, but currently 44% of the European workforce do not have these basic skills. This is a severe skills gap that Europe needs to close urgently to avoid economic downturn. ROOTED will consolidate the complimentary expertise of an international, interdisciplinary, multi-sectoral team to train a new generation of creative, resilient, adaptive multi-skilled scientists capable of innovating the fields of plant and soil sciences to actively contribute to the goal of doubling food production in a sustainable manner by 2050. Soil health and food is one of the 5 mission areas for Horizon Europe and the findings from ROOTED would be directly applicable to the EU’s Green deal and a Soil Deal for Europe. ROOTED graduates will have a level of scientific, communication and digital skills mastery that enables them to move straight into employment in agri-food businesses, seed and breeding companies, advisory and scientific roles.
Project ID
Funding period
1 January 2023 - 31 December 2026Total budget
EU contribution
Funding programme
Call for proposals
Type of action
Type of stakeholder
Project contribution to Mission Soil’s:
Specific objectives
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1. Reduce land degradation relating to desertification
Not targeted -
2. Conserve and increase soil organic carbon stocks
Not targeted -
3. No net soil sealing and increase the reuse of urban soils
Not targeted -
4. Reduce soil pollution and enhance restoration
Not targeted -
5. Prevent erosion
Not targeted -
6. Improve soil structure to enhance habitat quality for soil biota and crops
Partially targeted -
7. Reduce the EU global footprint on soils
Not targeted -
8. Increase soil literacy in society across Member States
Partially targeted
Operational objectives
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1. Build capacities and the knowledge base for soil stewardship
Targeted
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2. Co-create and upscale place-based innovations to improve soil health in all places
Partially targeted
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3. Develop an integrated EU soil monitoring system and track progress towards soil health
Not targeted
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4. Engage with the soil user community and society at large
Not targeted
Innovation hotspots
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1. Carbon farming
Not targeted
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2. Soil pollution and restoration
Not targeted
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3. Soil biodiversity including the microbiome
Targeted
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4. Circular economy solutions
Not targeted
Cross-cutting dimensions
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1. Business
Not targeted
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2. Digital
Targeted
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3. Territorial
Not targeted
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4. International
Not targeted
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